modified to inline for figure to be visible

I have modified the files with %matplotlib inline so that they can be visible in the gitlab, however I couldn't run the reconstructions for 2 reason: 1- the data access on the server 2- astra package didnt work on my computer. I have tried to run the files on the learnmore cinemax folder it didn't work since the kernel crashes!

Segmentation/01_Introduction.ipynb

 %% Cell type:code id: tags:
 ``` python
 # Load relevant libraries
 # scikit-image for image processing
 # Plot functions
 import matplotlib.pyplot as plt
+plt.gray();
 %matplotlib inline
 %matplotlib notebook
+%% Output
 %% Cell type:code id: tags:
 # Matplotlib is used for displaying the image. The colormap is given by cmap = "gray". You can try differnet colormaps
 # e.g. jet or summer
 plt.figure(figsize=(10,10))
-plt.imshow(im_org, cmap="gray")
-plt.show();
+plt.imshow(im_org);
 %% Output
 %% Cell type:code id: tags:
 %% Output
 %% Cell type:code id: tags:
 %% Output
 %% Cell type:code id: tags:
 %% Output
 %% Cell type:code id: tags:
 ``` python
 plt.title('Threshold segmented image - boolean')
 plt.subplot(1,2,2)
-plt.imshow(im_thres_float, cmap = "gray")
+plt.imshow(im_thres_float);
 plt.title('Threshold segmented image - float')
-plt.show();
 %% Output
+    Text(0.5, 1.0, 'Threshold segmented image - float')
 %% Cell type:markdown id: tags:
 %% Cell type:code id: tags:
 print(im_thres[0,0])
 # Let us try to go outside the image range. This will result in an index out of bounds error
 print(im_thres[0,c])
-
-
 %% Output
     ---------------------------------------------------------------------------
     IndexError                                Traceback (most recent call last)
-    <ipython-input-7-2b5ebf5825ae> in <module>
+    <ipython-input-21-fc2a6c938e6e> in <module>
           7
           8 # Let us try to go outside the image range. This will result in an index out of bounds error
     ----> 9 print(im_thres[0,c])
-         10
-         11
+
     IndexError: index 512 is out of bounds for axis 1 with size 512
 %% Cell type:code id: tags: