Tutorials
Structure of the Examples
The examples provided should work as a template or starting point for doing analysis of volumetric data from the synchrotron or other imaging modalities. Most of the examples are provides as Jupyter notebooks, which is a handy tool to develop code in a report like manner, including text and mathematical notation. Each example has a description and a link to a notebook. Some examples might require you to compile code or are provided in a language which is not supported by Jupyter notebooks, in that case, detailed instructions should be provided.
Introduction
-
01_JupyterNotebook
: Introduction to Jupyter notebooks and Python -
02_NumPy
: Introduction to NumPy -
03_Matplotlib
: Introduction to Matplitlib -
04_Debug
: Debugging and more
Segmentation
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01_Introdution
: Introduction to segmentation -
02_Filtering
: Filtering -
03_FeatureDetection
: Segmentation and feature detection -
04_EdgeLineDetection
: Edge and line detection -
05_BiasedCorrection
: Segmentation of chalk -
06_LaplaceFilter
: Segmentation of blob
Data
- data_chalk
- data_examples
- data_fibers
Software Tools
Contains tutorials and exercises on QIM software tools. For now, you can find tutorials on Layered Surface Detection.
Advanced Image Analysis Note
Contains the note.pdf of Advanced Image analysis course at DTU