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Tutorials

Structure of the Examples

The examples provided should work as a template or starting point for doing analysis of volumetric data from the synchrotron or other imaging modalities. Most of the examples are provides as Jupyter notebooks, which is a handy tool to develop code in a report like manner, including text and mathematical notation. Each example has a description and a link to a notebook. Some examples might require you to compile code or are provided in a language which is not supported by Jupyter notebooks, in that case, detailed instructions should be provided.

Introduction

  • 01_JupyterNotebook: Introduction to Jupyter notebooks and Python
  • 02_NumPy: Introduction to NumPy
  • 03_Matplotlib: Introduction to Matplitlib
  • 04_Debug: Debugging and more

Segmentation

  • 01_Introdution: Introduction to segmentation
  • 02_Filtering: Filtering
  • 03_FeatureDetection: Segmentation and feature detection
  • 04_EdgeLineDetection: Edge and line detection
  • 05_BiasedCorrection: Segmentation of chalk
  • 06_LaplaceFilter: Segmentation of blob

Data

  • data_chalk
  • data_examples
  • data_fibers

Advanced Image Analysis Note

Contains the note.pdf of Advanced Image analysis course at DTU