Tutorials
Structure of the Examples
The examples provided should work as a template or starting point for doing analysis of volumetric data from the synchrotron or other imaging modalities. Most of the examples are provides as Jupyter notebooks, which is a handy tool to develop code in a report like manner, including text and mathematical notation. Each example has a description and a link to a notebook. Some examples might require you to compile code or are provided in a language which is not supported by Jupyter notebooks, in that case, detailed instructions should be provided.
Introduction
-
01_JupyterNotebook
: Introduction to Jupyter notebooks and Python -
02_NumPy
: Introduction to NumPy -
03_Matplotlib
: Introduction to Matplitlib -
04_Debug
: Debugging and more
Segmentation
-
01_Introdution
: Introduction to segmentation -
02_Filtering
: Filtering -
03_FeatureDetection
: Segmentation and feature detection -
04_EdgeLineDetection
: Edge and line detection -
05_BiasedCorrection
: Segmentation of chalk -
06_LaplaceFilter
: Segmentation of blob
Data
- data_chalk
- data_examples
- data_fibers
Advanced Image Analysis Note
Contains the note.pdf of Advanced Image analysis course at DTU