- [Synchrotron imaging for validation and prediction models of diffusion MRI] (#Synchrotron-imaging-for-validation-and-prediction-models-of-diffusion-MRI)
- [Light-sheet Fluorescence microscopy is crosslinked with MRI ] (#Light-sheetFluorescence-microscopy-is-crosslinked-with-MRI)
## Magnetic resonance imaging of the brain
Magnetic resonance imaging (MRI) is an extremely versatile modality that allows us to acquire 3D images of the **brain** with many different “contrasts” leading to the collection of 4D or sometimes N-D volumes. **Modeling** these images means applying and developing **signal/image processing**, **biophysical models**, and **mathematical procedures** to report summary parameters that can reveal the presence of pathology like stroke, edema, trauma, neurodegeneration, demyelination, etc. There is a variety of MRI techniques like functional and structural MRI (relaxometry, susceptibility, etc.).
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@@ -101,7 +101,7 @@ For example see:
For example see:
*[Andersson et al., 2020, Axon morphology is modulated by the local environment and impacts the noninvasive investigation of its structure–function relationship, PNAS](https://doi.org/10.1073/pnas.2012533117)
*[Pingel, J. & Kjer, H.M., et al., 2022, 3D synchrotron imaging of muscle tissues at different atrophic stages in stroke and spinal cord injury: a proof-of-concept study, Scientific Reports](https://doi.org/10.1038/s41598-022-21741-z)
*[Pingel, J., ..., Dyrby, 2022, 3D synchrotron imaging of muscle tissues at different atrophic stages in stroke and spinal cord injury: a proof-of-concept study, Scientific Reports](https://doi.org/10.1038/s41598-022-21741-z)
## Light-sheet Fluorescence microscopy is crosslinked with MRI
